4JEO

Crystal structure of red fluorescent protein lanRFPdam exposed to prolonged X-ray irradiation

Structural Biology Knowledgebase: 4JEO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.150

Literature

Macromolecules
Sequence Display for 4JEO

Classification: FLUORESCENT PROTEIN

Total Structure Weight: 51674.48

Macromolecule Entities
Molecule Chains Length Organism Details
Red fluorescent protein blFP-R5 A, B 228 Branchiostoma lanceolatum Mutation: M1S, G58X, Y58X, G58X
Gene Name(s): blFP-R5
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CR2
Query on CR2
A, B L-PEPTIDE LINKING C13 H13 N3 O4 GLY , TYR , GLY

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.150
  • Space Group: P 64 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 134.27 α = 90.00
b = 134.27 β = 90.00
c = 156.85 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-02-27
  • Released Date: 2013-09-18
  • Deposition author(s): Pletnev, V.Z., Pletneva, N.V., Pletnev, S.V.

Revision History

No revisions since initial release