4J2X

CSL (RBP-Jk) with corepressor KyoT2 bound to DNA

Structural Biology Knowledgebase: 4J2X SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.188

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4J2X

Classification: TRANSCRIPTION / DNA BINDING PROTEIN / DNA

Total Structure Weight: 120725.91


Macromolecule Entities
Molecule Chains Length Organism Details
Recombining binding protein suppressor of hairless A, C 427 Mus musculus Fragment: Core domain (UNP residues 53-474)
Mutation: R115T
Gene Name(s): Rbpj Igkjrb1 Igkrsbp Rbpsuh
Four and a half LIM domains protein 1 B, D 28 Mus musculus Fragment: SEE REMARK 999
Gene Name(s): Fhl1
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3' E, G 15 Homo sapiens
5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3' F, H 15 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.188
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 62.16 α = 90.00
b = 97.29 β = 93.17
c = 144.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-02-05
  • Released Date: 2013-11-06
  • Deposition author(s): Collins, K.J., Kovall, R.A.

Revision History

  • 2014-01-29
    Type: Citation | Details: Citation update
  • 2014-01-15
    Type: Citation | Details: Citation update