X-ray structure of NifS-like protein from Rickettsia africae ESF-5
Seattle Structural Genomics Center for Infectious Disease (SSGCID), Abendroth, J., Sankaran, B., Fox III, D., Lorimer, D., Edwards, T.E.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
NifS-like protein | 380 | Rickettsia africae ESF-5 | Mutation(s): 0  Gene Names: spl1 | ||
UniProt | |||||
Find proteins for C3PNQ7 (Rickettsia africae (strain ESF-5)) Explore C3PNQ7  Go to UniProtKB:  C3PNQ7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C3PNQ7 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EDO Query on EDO | C [auth A], D [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CA Query on CA | E [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
LLP Query on LLP | A, B | L-PEPTIDE LINKING | C14 H22 N3 O7 P | LYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 57.02 | α = 90 |
b = 91.02 | β = 93.72 |
c = 72.62 | γ = 90 |
Software Name | Purpose |
---|---|
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
BOS | data collection |
XDS | data reduction |
XSCALE | data scaling |