4IVN

The Vibrio vulnificus NanR protein complexed with ManNAc-6P

Structural Biology Knowledgebase: 4IVN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.181

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4IVN

Classification: TRANSCRIPTION REGULATOR

Total Structure Weight: 61285.98

Macromolecule Entities
Molecule Chains Length Organism Details
Transcriptional regulator A, B 278 Vibrio vulnificus

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BMX
Query on BMX

A, B 2-(ACETYLAMINO)-2-DEOXY-6-O-PHOSPHONO-ALPHA- D-MANNOPYRANOSE
C8 H16 N O9 P
BRGMHAYQAZFZDJ-UOLFYFMNSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.181
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 109.21 α = 90.00
b = 109.21 β = 90.00
c = 82.47 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-01-23
  • Released Date: 2013-07-17
  • Deposition author(s): Hwang, J., Kim, M.H.

Revision History

  • 2013-11-20
    Type: Citation | Details: Citation update