Crystal structure of NKp65 bound to its ligand KACL
4IOP
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Immune System
    Structure Weight: 35380.59
    Molecule: C-type lectin domain family 2 member A
    Polymer: 1 Type: protein Length: 142
    Chains: A
    Organism: Homo sapiens
    Gene Names: Gene View for CLEC2A KACL UNQ5792/PRO19597
    UniProtKB: Protein Feature View | Search PDB | Q6UVW9  
    Molecule: Killer cell lectin-like receptor subfamily F member 2
    Polymer: 2 Type: protein Length: 158
    Chains: B
    Organism: Homo sapiens
    Gene Name: Gene View for KLRF2
    UniProtKB: Protein Feature View | Search PDB | D3W0D1  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MAN
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    MAN C6 H12 O6
    ALPHA-D-MANNOSE
    NAG
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    NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
    NAG:4IOP
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Li, Y.

    Deposition:   2013-01-08
    Release:   2013-07-17
    Last Modified (REVDAT):   2013-07-24
     
  •   Revision History    Hide
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    2013-07-24
    Data collection
    2013-07-24
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   3.20
    R-Value: 0.252 (obs.)
    R-Free: 0.297
    Space Group: I 41 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 74.64 α = 90.00 
    b = 74.64 β = 90.00 
    c = 271.08 γ = 90.00