4II1

Crystal structure of the zinc finger of ZGPAT

Structural Biology Knowledgebase: 4II1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.208

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4II1

Classification: TRANSCRIPTION

Total Structure Weight: 75373.12

Macromolecule Entities
Molecule Chains Length Organism Details
Zinc finger CCCH-type with G patch domain-containing protein A, B, C, D 167 Homo sapiens Fragment: UNP residues 119-268
Gene Name(s): ZGPAT Gene View GPATC6 GPATCH6 KIAA1847 ZC3H9 ZC3HDC9 ZIP

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
UNX
Query on UNX

A, B, C, D UNKNOWN ATOM OR ION
X
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.208
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 55.17 α = 90.00
b = 87.07 β = 95.65
c = 76.57 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-12-19
  • Released Date: 2013-02-13
  • Deposition author(s): Bian, C., Tempel, W., Dong, A., Chao, X., Fu, M., Wernimont, A.K., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

Revision History

No revisions since initial release