Crystal Structure of BenM_DBD/benA site 1 DNA Complex
DOI:10.2210/pdb4iht/pdb   NDB ID: NA2174
Primary Citation
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 74451.08
    Molecule: HTH-type transcriptional regulator BenM
    Polymer: 1 Type: protein Length: 94
    Chains: A, B, C, D
    Fragment: UNP residues 1-87
    Organism: Acinetobacter sp. ADP1
    Gene Names: benM benR ACIAD1435
    UniProtKB: Search PDB | O68014   Protein Feature View
    Molecule: benA site 1 DNA
    Polymer: 2 Type: dna Length: 25
    Chains: E, G
    Molecule: benA site 1 DNA - complement
    Polymer: 3 Type: dna Length: 25
    Chains: F, H
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  • MolProbity Ramachandran Plot

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Acinetobacter sp.   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
  •   Related PDB Entries Hide
    Identifier Details
    3M1E   BenM DNA Binding Domain 
    4IHS   Crystal Structure of BenM_DBD/catB site 1 DNA Complex 
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA2174
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Alanazi, A.,  Momany, C.,  Neidle, E.L.

    Deposition:   2012-12-19
    Release:   2013-07-10
    Last Modified (REVDAT):   2014-01-15
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  •   Experimental Details Hide
    Exp. Data:
      Structure Factors
    Resolution[Å]:   3.00
    R-Value: 0.188 (obs.)
    R-Free: 0.245
    Space Group: P 21 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 58.96 α = 90.00 
    b = 300.30 β = 90.00 
    c = 46.00 γ = 90.00