Macromolecules
Sequence Display for 4I9Y

Classification: TRANSPORT PROTEIN

Total Structure Weight: 112918.72

Macromolecule Entities
Molecule Chains Length Organism Details
E3 SUMO-protein ligase RanBP2 A, B, C..., D, E, FA, B, C, D, E, F 167 Homo sapiens EC#: 6.3.2 IUBMB
Gene Name(s): RANBP2 Gene View NUP358
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TLA
Query on TLA

A, B, E L(+)-TARTARIC ACID
C4 H6 O6
FEWJPZIEWOKRBE-JCYAYHJZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B, C, D, E, F GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B, C, D, E, F CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.158
  • R-Value Work: 0.123
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 104.06 α = 90.00
b = 97.13 β = 117.38
c = 108.15 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-12-05
  • Released Date: 2013-01-30
  • Deposition author(s): Lin, D.H., Zimmermann, S., Stuwe, T., Stuwe, E., Hoelz, A.

Revision History

  • 2013-04-24
    Type: Citation | Details: Citation update
  • 2013-02-13
    Type: Citation | Details: Citation update