Melanoma differentiation associated protein-5 Helicase domain complex with inhibitor Non-structural protein V
Primary Citation
  •   Molecular Description Hide
    Classification: Hydrolase/hydrolase Inhibitor
    Structure Weight: 34562.34
    Molecule: Melanoma differentiation associated protein-5
    Polymer: 1 Type: protein Length: 243
    Chains: A
    Fragment: helicase domain region 641-665 replaced by SGSGS, proteolysis by trypsin during crystallization
    Organism: Sus scrofa
    Gene Name: MDA5
    UniProtKB: Search PDB | A7LCX1   Protein Feature View
    Molecule: Non-structural protein V
    Polymer: 2 Type: protein Length: 52
    Chains: B
    Fragment: region 55-79 replaced by SGSGSGSGSG, proteolysis by trypsin during crystallization
    Organism: Simian virus 5 (strain W3)
    Gene Name: P/V
    UniProtKB: Search PDB | P11207   Protein Feature View
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Sus scrofa   Taxonomy   Common Name: Pigs,swine,wild boar Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Simian virus 5   Taxonomy   Common Name: Sv5 Expression System: Escherichia coli  
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ZN Zn
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE C5 H11 N O2 Se MET lPeptideLinking
  •   External Domain Annotations Hide
  •   Structural Biology Knowledgebase Data Hide
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Motz, C.,  Witte, G.,  Hopfner, K.P.

    Deposition:   2012-11-21
    Release:   2013-01-30
    Last Modified (REVDAT):   2013-02-20
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  •   Experimental Details Hide
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.29
    R-Value: 0.182 (obs.)
    R-Free: 0.230
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 51.07 α = 90.00 
    b = 52.49 β = 90.00 
    c = 120.79 γ = 90.00