Diversity of ubiquitin and ISG15 specificity amongst nairoviruses viral ovarian tumor domain proteases
4HXD
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/viral Protein
    Structure Weight: 57469.32
    Molecule: Polyubiquitin-C
    Polymer: 1 Type: protein Length: 75
    Chains: A, C
    EC#: 3.4.19.12   
    Organism: Homo sapiens
    Gene Name: Gene View for UBC
    UniProtKB: Protein Feature View | Search PDB | P0CG48  
    Molecule: RNA-directed RNA polymerase L
    Polymer: 2 Type: protein Length: 174
    Chains: B, D
    EC#: 2.7.7.48    3.4.19.12   
    Organism: Dugbe virus (isolate ArD44313)
    Gene Name: L
    UniProtKB: Protein Feature View | Search PDB | Q66431  
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Dugbe virus (isolate ard44313)   Taxonomy   Common Name: Dugv Expression System: Escherichia coli  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    3CN
    Search 
    Download 
    3CN C3 H9 N
    3-AMINOPROPANE
    SO4
    Search 
    Download 
    SO4 O4 S
    SULFATE ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Capodagli, G.C.,  Pegan, S.D.

    Deposition:   2012-11-09
    Release:   2013-02-13
    Last Modified (REVDAT):   2013-04-24
     
  •   Revision History    Hide
    Mouse over text for details
    2013-04-24
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.85
    R-Value: 0.214 (obs.)
    R-Free: 0.278
    Space Group: C 1 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 113.51 α = 90.00 
    b = 39.99 β = 97.33 
    c = 114.19 γ = 90.00