4HOG

Candida glabrata dihydrofolate reductase complexed with NADPH and 5-[3-(2-methoxy-4-phenylphenyl)but-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine (UCP111H)

Structural Biology Knowledgebase: 4HOG SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.185

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4HOG

Classification: OXIDOREDUCTASE / OXIDOREDUCTASE INHIBITOR

Total Structure Weight: 55204.55

Macromolecule Entities
Molecule Chains Length Organism Details
Dihydrofolate Reductase A, B 227 Candida glabrata

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
18H
Query on 18H

A, B 5-[3-(2-methoxy-4-phenylphenyl)but-1-yn-1- yl]-6-methylpyrimidine-2,4-diamine
5-[(3S)-3-(3-methoxybiphenyl-4-yl)but-1-yn- 1-yl]-6-methylpyrimidine-2,4-diamine (Synonym)
C22 H22 N4 O
DATCFVVEPPDLRQ-AWEZNQCLSA-N
Ligand Explorer
 
JSmol
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
NDP
Query on NDP

A, B NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
Ligand Explorer
 
JSmol
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
18H N/A in BindingDB
IC50: 5.5 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.185
  • Space Group: P 41
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 42.83 α = 90.00
b = 42.83 β = 90.00
c = 229.95 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-10-22
  • Released Date: 2014-03-19
  • Deposition author(s): Paulsen, J.L., Anderson, A.C.

Revision History

  • 2014-04-09
    Type: Citation | Details: Citation update