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GR DNA Binding Domain R460D/D462R - TSLP nGRE Complex
DOI:10.2210/pdb4hn6/pdb   NDB ID: NA2086
4HN6
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 35581.74
    Molecule: Glucocorticoid receptor
    Polymer: 1 Type: protein Length: 114
    Chains: A, B
    Mutation: R460D,D462R
    Organism: Homo sapiens
    Gene Names: Gene View for NR3C1 GRL
    UniProtKB: Protein Feature View | Search PDB | P04150  
    Molecule: DNA (5'-D(*CP*GP*CP*CP*TP*CP*CP*GP*GP*GP*AP*GP*AP*GP*CP*T)-3')
    Polymer: 2 Type: dna Length: 16
    Chains: C
    Organism: synthetic construct
    Molecule: DNA (5'-D(*AP*GP*CP*TP*CP*TP*CP*CP*CP*GP*GP*AP*GP*GP*CP*G)-3')
    Polymer: 3 Type: dna Length: 16
    Chains: D
    Organism: synthetic construct
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct (synthetic construct)   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct (synthetic construct)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4HN5   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ZN
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    ZN Zn
    ZINC ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2086
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Hudson, W.H.,  Youn, C.E,  Ortlund, E.A.

    Deposition:   2012-10-18
    Release:   2012-12-12
    Last Modified (REVDAT):   2013-01-16
     
  •   Revision History    Hide
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    2013-01-16
    Citation
    2013-01-02
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.55
    R-Value: 0.201 (obs.)
    R-Free: 0.248
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 38.74 α = 90.00 
    b = 87.87 β = 90.00 
    c = 103.15 γ = 90.00