Crystal structure of p53 core domain in complex with DNA
DOI:10.2210/pdb4hje/pdb   NDB ID: NA2081
4HJE
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 103265.19
    Molecule: Cellular tumor antigen p53
    Polymer: 1 Type: protein Length: 200
    Chains: A, B, C, D
    Fragment: UNP residues 92-291
    Organism: Homo sapiens
    Gene Names: Gene View for TP53 P53
    UniProtKB: Protein Feature View | Search PDB | P04637  
    Molecule: DNA (5'-D(*TP*CP*AP*CP*AP*AP*GP*TP*TP*AP*GP*AP*GP*AP*CP*AP*AP*GP*CP*CP*T)-3')
    Polymer: 2 Type: dna Length: 21
    Chains: E
    Molecule: DNA (5'-D(*AP*GP*GP*CP*TP*TP*GP*TP*CP*TP*CP*TP*AP*AP*CP*TP*TP*GP*TP*GP*A)-3')
    Polymer: 3 Type: dna Length: 21
    Chains: F
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ZN
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    ZN Zn
    ZINC ION
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA2081
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Chen, Y.,  Chen, L.

    Deposition:   2012-10-12
    Release:   2013-07-17
    Last Modified (REVDAT):   2013-10-09
     
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    2013-10-09
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.91
    R-Value: 0.189 (obs.)
    R-Free: 0.228
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 65.42 α = 90.00 
    b = 93.88 β = 90.00 
    c = 145.63 γ = 90.00