4H48

1.45 angstrom CyPet Structure at pH7.0

Structural Biology Knowledgebase: 4H48 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.178

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4H48

Classification: FLUORESCENT PROTEIN

Total Structure Weight: 27009.70

Macromolecule Entities
Molecule Chains Length Organism Details
Green fluorescent protein A 239 Aequorea victoria Mutation: M1V, T9G, V11I, D19E, F64L, S66X, Y66X, X66X, A87V, N146I, M153T, V163A, I167A, E172T, L194I
Gene Name(s): GFP
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TRS
Query on TRS

A 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER (Synonym)
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CRF
Query on CRF
A L-PEPTIDE LINKING C17 H18 N4 O4 THR , TRP , GLY

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.178
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 50.88 α = 90.00
b = 62.92 β = 90.00
c = 70.21 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-09-17
  • Released Date: 2013-09-18
  • Deposition author(s): Hu, X.-J., Liu, R.

Revision History

No revisions since initial release