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Crystal structures of bacterial RNA Polymerase paused elongation complexes
DOI:10.2210/pdb4gzy/pdb   NDB ID: NA2034
4GZY
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna/rna
    Structure Weight: 399532.02
    Molecule: DNA-directed RNA polymerase subunit alpha
    Polymer: 1 Type: protein Length: 315
    Chains: A, B
    EC#: 2.7.7.6   
    Organism: Thermus thermophilus HB8
    Gene Names: rpoA TTHA1664
    UniProtKB: Protein Feature View | Search PDB | Q5SHR6  
    Molecule: DNA-directed RNA polymerase subunit beta
    Polymer: 2 Type: protein Length: 1119
    Chains: C
    EC#: 2.7.7.6   
    Organism: Thermus thermophilus HB8
    Gene Names: rpoB TTHA1813
    UniProtKB: Protein Feature View | Search PDB | Q8RQE9  
    Molecule: DNA-directed RNA polymerase subunit beta'
    Polymer: 3 Type: protein Length: 1534
    Chains: D
    EC#: 2.7.7.6   
    Organism: Thermus thermophilus HB8
    Gene Names: rpoC TTHA1812
    UniProtKB: Protein Feature View | Search PDB | Q8RQE8  
    Molecule: DNA-directed RNA polymerase subunit omega
    Polymer: 4 Type: protein Length: 99
    Chains: E
    EC#: 2.7.7.6   
    Organism: Thermus thermophilus HB8
    Gene Names: rpoZ TTHA1561
    UniProtKB: Protein Feature View | Search PDB | Q8RQE7  
    Molecule: non-template DNA
    Polymer: 5 Type: dna Length: 13
    Chains: N
    Organism: synthetic construct
    Molecule: RNA transcript
    Polymer: 6 Type: rna Length: 29
    Chains: R
    Organism: synthetic construct
    Molecule: template DNA
    Polymer: 7 Type: dna Length: 22
    Chains: T
    Organism: synthetic construct
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Thermus thermophilus   Taxonomy   Expression System: Thermus thermophilus  
    Polymer: 2
    Scientific Name: Thermus thermophilus   Taxonomy   Expression System: Thermus thermophilus  
    Polymer: 3
    Scientific Name: Thermus thermophilus   Taxonomy   Expression System: Thermus thermophilus  
    Polymer: 4
    Scientific Name: Thermus thermophilus   Taxonomy   Expression System: Thermus thermophilus  
    Polymer: 5
    Scientific Name: Synthetic construct (synthetic construct)   Taxonomy    
    Polymer: 6
    Scientific Name: Synthetic construct (synthetic construct)   Taxonomy    
    Polymer: 7
    Scientific Name: Synthetic construct (synthetic construct)   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
    ZN
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    ZN Zn
    ZINC ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2034
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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