4GH9

Crystal structure of Marburg virus VP35 RNA binding domain

Structural Biology Knowledgebase: 4GH9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.161

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4GH9

Classification: VIRAL PROTEIN RNA BINDING PROTEIN

Total Structure Weight: 16657.07

Macromolecule Entities
Molecule Chains Length Organism Details
Polymerase cofactor VP35 A 146 Marburg marburgvirus Fragment: UNP residues 204-329
Mutation: S296C
Gene Name(s): VP35

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.161
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 42.52 α = 90.00
b = 90.88 β = 90.00
c = 65.93 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-08-07
  • Released Date: 2012-08-15
  • Deposition author(s): Bale, S., Jean-Philippe, J., Bornholdt, Z.A., Kimberlin, C.K., Halfmann, P., Zandonatti, M.A., Kunert, J., Kroon, G.J.A., Kawaoka, Y., MacRae, I.J., Wilson, I.A., Saphire, E.O.

Revision History

  • 2012-10-24
    Type: Citation | Details: Citation update