4GGK

Crystal structure of Zucchini from mouse (mZuc / PLD6 / MitoPLD) bound to tungstate

Structural Biology Knowledgebase: 4GGK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.209

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4GGK

Classification: HYDROLASE

Total Structure Weight: 22656.23

Macromolecule Entities
Molecule Chains Length Organism Details
Mitochondrial cardiolipin hydrolase A 196 Mus musculus Fragment: Cytoplasmic domain, UNP residues 31-221
Gene Name(s): Pld6

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
WO4
Query on WO4

A TUNGSTATE(VI)ION
O4 W
PBYZMCDFOULPGH-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.209
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 38.86 α = 90.00
b = 38.86 β = 90.00
c = 213.31 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-08-06
  • Released Date: 2012-10-10
  • Deposition author(s): Ipsaro, J.J., Haase, A.D., Hannon, G.J., Joshua-Tor, L.

Revision History

  • 2012-12-12
    Type: Citation | Details: Citation update