4G6U

CdiA-CT/CdiI toxin and immunity complex from Escherichia coli

Structural Biology Knowledgebase: 4G6U SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.180

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4G6U

Classification: TOXIN

Total Structure Weight: 53668.79

Macromolecule Entities
Molecule Chains Length Organism Details
EC869 CdiA-CT A 292 Escherichia coli Fragment: UNP residues 88-377
Mutation: V161I
EC869 CdiI B 177 Escherichia coli

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

B ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
YT3
Query on YT3

B YTTRIUM (III) ION
Y
GRTBAGCGDOYUBE-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.180
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 81.70 α = 90.00
b = 103.63 β = 90.00
c = 125.17 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-19
  • Released Date: 2012-12-12
  • Deposition author(s): Morse, R.P., Nikolakakis, K., Willet, J., Gerrick, E., Low, D.A., Hayes, C.S., Goulding, C.W.

Revision History

  • 2013-01-09
    Type: Citation | Details: Citation update