4G32

Crystal Structure of a Phospholipid-Lipoxygenase Complex from Pseudomonas aeruginosa at 1.75A (P21212)

Structural Biology Knowledgebase: 4G32 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.179

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4G32

Classification: OXIDOREDUCTASE

Total Structure Weight: 76995.25

Macromolecule Entities
Molecule Chains Length Organism Details
15S-LIPOXYGENASE A 688 Pseudomonas aeruginosa EC#: 1.13.11.12 IUBMB 1.13.11.58 IUBMB
Fragment: Secretable Pa_LOX without the periplasmic signal peptide
Gene Name(s): lox

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZPE
Query on ZPE

A (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}- 2-(tetradec-5-enoyloxy)propyl (11Z)-octadec- 11-enoate
C37 H70 N O8 P
SWNDXEVFPWKPGK-SPZKJSGBSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE2
Query on FE2

A FE (II) ION
Fe
CWYNVVGOOAEACU-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.179
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 132.70 α = 90.00
b = 115.97 β = 90.00
c = 42.64 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-13
  • Released Date: 2013-11-06
  • Deposition author(s): Carpena, X., Garreta, A., Val-Moraes, S.P., Garcia-Fernandez, Q., Fita, I.

Revision History

  • 2013-12-25
    Type: Citation | Details: Citation update