4G0O

Crystal structure of Arabidopsis thaliana AGO5 MID domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.19 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.217

Literature

Macromolecules
Sequence Display for 4G0O

Classification: GENE REGULATION

Total Structure Weight: 31052.60

Macromolecule Entities
Molecule Chains Length Organism Details
Protein argonaute 5 A, B 139 Arabidopsis thaliana Fragment: MID domain, UNP residues 562-699
Gene Name(s): AGO5 At2g27880 T1E2.20
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.19 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.217
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 34.82 α = 75.40
b = 37.08 β = 76.06
c = 62.73 γ = 90.12

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-09
  • Released Date: 2012-07-25
  • Deposition author(s): Frank, F., Hauver, J., Sonenberg, N., Nagar, B.

Revision History

  • Version 1_0: 2012-07-25

    Type: Initial release

  • Version 1_1: 2012-08-29

    Type: Database references

  • Version 1_2: 2012-09-12

    Type: Database references