4FUM

Structural basis for Zn2+-dependent intercellular adhesion in staphylococcal biofilms

Structural Biology Knowledgebase: 4FUM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.198

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4FUM

Classification: MEMBRANE PROTEIN

Total Structure Weight: 22695.96

Macromolecule Entities
Molecule Chains Length Organism Details
Accumulation associated protein A 208 Staphylococcus epidermidis Fragment: UNP residues 2017-2223
Mutation: S5P, L24M, L51M, L152M, L179M

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SCN
Query on SCN

A THIOCYANATE ION
C N S
ZMZDMBWJUHKJPS-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.198
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 89.72 α = 90.00
b = 33.64 β = 121.06
c = 81.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-06-28
  • Released Date: 2013-01-16
  • Deposition author(s): Conrady, D.G., Wilson, J.J., Herr, A.B.

Revision History

  • 2013-01-30
    Type: Citation | Details: Citation update