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Crystal Structure of Shikimate Dehydrogenase (aroE) Clinical Variant v2356 from Helicobacter pylori in Complex with Shikimate
4FSH
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Oxidoreductase
    Structure Weight: 60849.35
    Molecule: Shikimate dehydrogenase
    Polymer: 1 Type: protein Length: 271
    Chains: A, B
    EC#: 1.1.1.25   
    Organism: Helicobacter pylori 26695
    Gene Names: aroE HP_1249
    UniProtKB: Protein Feature View | Search PDB | P56119  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Helicobacter pylori   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3PHG  Crystal structure of the Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori 
    3PHH  Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate 
    3PHI  Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate and NADPH 
    3PHJ  Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with 3-Dehydroshikimate 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    SKM
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    SKM C7 H10 O5
    (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE- 1-CARBOXYLIC ACID
    SKM:4FSH
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Cheng, W.C.,  Chen, T.J.,  Wang, W.C.

    Deposition:   2012-06-27
    Release:   2013-01-30
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.85
    R-Value: 0.217 (obs.)
    R-Free: 0.260
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 63.12 α = 90.00 
    b = 71.87 β = 90.00 
    c = 176.39 γ = 90.00