4FSH

Crystal Structure of Shikimate Dehydrogenase (aroE) Clinical Variant v2356 from Helicobacter pylori in Complex with Shikimate

Structural Biology Knowledgebase: 4FSH SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.214

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4FSH

Classification: OXIDOREDUCTASE

Total Structure Weight: 60849.35

Macromolecule Entities
Molecule Chains Length Organism Details
Shikimate dehydrogenase A, B 271 Helicobacter pylori EC#: 1.1.1.25 IUBMB
Mutation: E32K, R34G, H40R, S52N, G87A, A88S, V89I, Q115H, K116Q, A126S, E136G, Q143K, S151P, H185N, G202A, S218A, T225I, A239S
Gene Name(s): aroE HP_1249

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SKM
Query on SKM

A (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE- 1-CARBOXYLIC ACID
SHIKIMATE (Synonym)
C7 H10 O5
JXOHGGNKMLTUBP-HSUXUTPPSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.214
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 63.12 α = 90.00
b = 71.87 β = 90.00
c = 176.39 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-06-27
  • Released Date: 2013-01-30
  • Deposition author(s): Cheng, W.C., Chen, T.J., Wang, W.C.

Revision History

No revisions since initial release