4FC9

Structure of the C-terminal domain of the type III effector Xcv3220 (XopL)

Structural Biology Knowledgebase: 4FC9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.196
  • R-Value Work: 0.152

Literature

Macromolecules
Sequence Display for 4FC9

Classification: Structural Genomics Unknown Function

Total Structure Weight: 70385.20

Macromolecule Entities
Molecule Chains Length Organism Details
uncharacterized protein A, B, C 208 Xanthomonas euvesicatoria Fragment: UNP residues 474-660
Gene Name(s): XCV3220
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B, C CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 119.20 α = 90.00
b = 119.20 β = 90.00
c = 38.68 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-24
  • Released Date: 2012-06-13
  • Deposition author(s): Singer, A.U., Xu, X., Cui, H., Tan, K., Joachimiak, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)

Revision History

No revisions since initial release