4F8E

Crystal structure of human PRS1 D52H mutant

Structural Biology Knowledgebase: 4F8E SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.27 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.178

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4F8E

Classification: TRANSFERASE

Total Structure Weight: 72572.36

Macromolecule Entities
Molecule Chains Length Organism Details
Ribose-phosphate pyrophosphokinase 1 A, B 326 Homo sapiens EC#: 2.7.6.1 IUBMB
Mutation: D52H
Gene Name(s): PRPS1 Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.27 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.178
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 170.31 α = 90.00
b = 170.31 β = 90.00
c = 61.75 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-17
  • Released Date: 2013-05-22
  • Deposition author(s): Chen, P., Teng, M., Li, X.

Revision History

  • 2014-03-12
    Type: Citation | Details: Citation update