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Macromolecular Machine 6
4F7U
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Splicing
    Structure Weight: 141451.69
    Molecule: Small nuclear ribonucleoprotein Sm D1
    Polymer: 1 Type: protein Length: 119
    Chains: A, C
    Organism: Mus musculus
    Gene Name: Snrpd1
    UniProtKB: Protein Feature View | Search PDB | P62315  
    Molecule: Small nuclear ribonucleoprotein Sm D2
    Polymer: 2 Type: protein Length: 118
    Chains: B, D
    Organism: Mus musculus
    Gene Name: Snrpd2
    UniProtKB: Protein Feature View | Search PDB | P62317  
    Molecule: Small nuclear ribonucleoprotein E
    Polymer: 3 Type: protein Length: 92
    Chains: E, H
    Organism: Mus musculus
    Gene Name: Snrpe
    UniProtKB: Protein Feature View | Search PDB | P62305  
    Molecule: Small nuclear ribonucleoprotein F
    Polymer: 4 Type: protein Length: 86
    Chains: F, I
    Organism: Xenopus laevis
    Gene Name: snrpf
    UniProtKB: Protein Feature View | Search PDB | P62321  
    Molecule: Small nuclear ribonucleoprotein G
    Polymer: 5 Type: protein Length: 76
    Chains: G, J
    Organism: Mus musculus
    Gene Name: Snrpg
    UniProtKB: Protein Feature View | Search PDB | P62309  
    Molecule: ICLn protein
    Polymer: 6 Type: protein Length: 129
    Chains: P, Q
    Organism: Drosophila melanogaster
    Gene Names: icln CG4924
    UniProtKB: Protein Feature View | Search PDB | A1ZAW5  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Mus musculus   Taxonomy   Common Name: Mouse Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Mus musculus   Taxonomy   Common Name: Mouse Expression System: Escherichia coli  
    Polymer: 3
    Scientific Name: Mus musculus   Taxonomy   Common Name: Mouse Expression System: Escherichia coli  
    Polymer: 4
    Scientific Name: Xenopus laevis   Taxonomy   Common Name: Clawed frog,common platanna,platanna Expression System: Escherichia coli  
    Polymer: 5
    Scientific Name: Mus musculus   Taxonomy   Common Name: Mouse Expression System: Escherichia coli  
    Polymer: 6
    Scientific Name: Drosophila melanogaster   Taxonomy   Common Name: Fruit fly Expression System: Escherichia coli  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    P6G
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    P6G C12 H26 O7
    HEXAETHYLENE GLYCOL
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Grimm, C.,  Pelz, J.P.

    Deposition:   2012-05-16
    Release:   2013-01-30
    Last Modified (REVDAT):   2013-03-13
     
  •   Revision History    Hide
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    2013-03-13
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.90
    R-Value: 0.183 (obs.)
    R-Free: 0.221
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 180.72 α = 90.00 
    b = 65.30 β = 92.47 
    c = 99.35 γ = 90.00