4F7T

Crystal Structure of HLA-A*2402 Complexed with a Newly Identified Peptide from 2009 H1N1 PB1 (498-505)

Structural Biology Knowledgebase: 4F7T SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4F7T

Classification: IMMUNE SYSTEM

Total Structure Weight: 89073.81

Macromolecule Entities
Molecule Chains Length Organism Details
HLA class I histocompatibility antigen, A-24 alpha chain A, D 275 Homo sapiens Fragment: unp residues 25-298
Gene Name(s): HLA-A Gene View HLAA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Beta-2-microglobulin B, E 100 Homo sapiens Fragment: unp residues 21-119
Gene Name(s): B2M Gene View CDABP0092 HDCMA22P
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
RNA-directed RNA polymerase catalytic subunit C, F 8 Influenza a virus EC#: 2.7.7.48 IUBMB
Fragment: unp residues 498-505
Gene Name(s): PB1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.196
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 52.84 α = 97.70
b = 66.58 β = 101.03
c = 70.36 γ = 111.84

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-16
  • Released Date: 2012-10-10
  • Deposition author(s): Liu, J., Zhang, S., Tan, S., Yi, Y., Wu, B., Zhu, F., Wang, H., Qi, J., Gao, G.F.

Revision History

  • 2012-12-05
    Type: Citation | Details: Citation update