4F5B

Triple mutant Src SH2 domain bound to phosphotyrosine

Structural Biology Knowledgebase: 4F5B SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.57 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.198

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4F5B

Classification: PROTEIN BINDING

Total Structure Weight: 12960.59

Macromolecule Entities
Molecule Chains Length Organism Details
Proto-oncogene tyrosine-protein kinase Src A 112 Homo sapiens EC#: 2.7.10.2 IUBMB
Fragment: SH2 domain
Mutation: T183V, C188A, K206L
Gene Name(s): SRC Gene View SRC1

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PTR
Query on PTR

A O-PHOSPHOTYROSINE
PHOSPHONOTYROSINE (Synonym)
C9 H12 N O6 P
DCWXELXMIBXGTH-QMMMGPOBSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.57 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.198
  • Space Group: P 61
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 67.60 α = 90.00
b = 67.60 β = 90.00
c = 46.80 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-12
  • Released Date: 2012-10-03
  • Deposition author(s): Kaneko, T., Huang, H., Cao, X., Li, C., Voss, C., Sidhu, S.S., Li, S.S.

Revision History

No revisions since initial release