4EYK

Crystal structure of solute binding protein of ABC transporter from Rhodopseudomonas palustris BisB5 in complex with 3,4-dihydroxy benzoic acid

Structural Biology Knowledgebase: 4EYK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.182
  • R-Value Work: 0.133

Literature

Macromolecules
Sequence Display for 4EYK

Classification: TRANSPORT PROTEIN

Total Structure Weight: 40199.63

Macromolecule Entities
Molecule Chains Length Organism Details
Twin-arginine translocation pathway signal A 368 Rhodopseudomonas palustris Fragment: UNP residues 27-392
Gene Name(s): RPD_1586
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DHB
Query on DHB

A 3,4-DIHYDROXYBENZOIC ACID
C7 H6 O4
YQUVCSBJEUQKSH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 46.61 α = 90.00
b = 131.90 β = 90.00
c = 130.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-01
  • Released Date: 2012-05-30
  • Deposition author(s): Chang, C., Mack, J., Zerbs, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2012-10-24
    Type: Citation | Details: Citation update
  • 2012-09-12
    Type: Citation | Details: Citation update