Macromolecules
Sequence Display for 4EJ7

Classification: TRANSFERASE

Total Structure Weight: 103424.09

Macromolecule Entities
Molecule Chains Length Organism Details
Aminoglycoside 3'-phosphotransferase AphA1-IAB A, B, C 292 Acinetobacter baumannii EC#: 2.7.1.95 IUBMB
Gene Name(s): ABAYE3578
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A, B, C ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PEG
Query on PEG

A DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B, C CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.29 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.213
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 85.36 α = 90.00
b = 152.47 β = 90.00
c = 165.57 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-06
  • Released Date: 2012-04-18
  • Deposition author(s): Stogios, P.J., Minasov, G., Tan, K., Evdokimova, E., Egorova, O., Di Leo, R., Shakya, T., Wright, G.D., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
  • Previous versions: 3R78

Revision History

  • 2013-06-26
    Type: Database references
  • 2013-08-07
    Type: Database references
  • 2013-09-04
    Type: Database references