Crystal Structure of the Heterotrimeric EGChead Peripheral Stalk Complex of the Yeast Vacuolar ATPase - second conformation
4EFA
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 54697.83
    Molecule: V-type proton ATPase subunit C
    Polymer: 1 Type: protein Length: 130
    Chains: C
    EC#: 3.6.3.14   
    Fragment: UNP Residues 158-277
    Organism: Saccharomyces cerevisiae S288c
    Gene Names: VMA5 VAT3 VATC YKL080W YKL410
    UniProtKB: Protein Feature View | Search PDB | P31412  
    Molecule: V-type proton ATPase subunit G
    Polymer: 2 Type: protein Length: 119
    Chains: G
    EC#: 3.6.3.14   
    Organism: Saccharomyces cerevisiae S288c
    Gene Names: VMA10 YHR039C-A YHR039BC YHR039C-B
    UniProtKB: Protein Feature View | Search PDB | P48836  
    Molecule: V-type proton ATPase subunit E
    Polymer: 3 Type: protein Length: 233
    Chains: E
    EC#: 3.6.3.14   
    Organism: Saccharomyces cerevisiae S288c
     
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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast Expression System: Escherichia coli  
    Polymer: 3
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    4DL0   Same protein complex, different conformation 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    SO4
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    SO4 O4 S
    SULFATE ION
     
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Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Oot, R.A.,  Huang, L.S.,  Berry, E.A.,  Wilkens, S.

    Deposition:   2012-03-29
    Release:   2012-10-10
    Last Modified (REVDAT):   2012-11-28
     
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    2012-11-28
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.82
    R-Value: 0.235 (obs.)
    R-Free: 0.277
    Space Group: P 2 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 51.54 α = 90.00 
    b = 93.65 β = 90.00 
    c = 116.89 γ = 90.00