4DGK

Crystal structure of Phytoene desaturase CRTI from Pantoea ananatis

Structural Biology Knowledgebase: 4DGK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.190

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4DGK

Classification: OXIDOREDUCTASE

Total Structure Weight: 56448.89

Macromolecule Entities
Molecule Chains Length Organism Details
Phytoene dehydrogenase A 501 Pantoea ananatis EC#: 1.14.99 IUBMB
Gene Name(s): crtI

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.190
  • Space Group: P 32 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 90.69 α = 90.00
b = 90.69 β = 90.00
c = 130.03 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-26
  • Released Date: 2012-10-10
  • Deposition author(s): Schaub, P., Yu, Q., Gemmecker, S., Poussin-Courmontagne, P., Mailliot, J, McEwen, A.G., Ghisla, S., Beyer, P., Cavarelli, J.

Revision History

No revisions since initial release