4DCV

Crystal Structure of B. subtilis EngA in complex with GMPPCP

Structural Biology Knowledgebase: 4DCV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.181

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4DCV

Classification: HYDROLASE

Total Structure Weight: 51521.61

Macromolecule Entities
Molecule Chains Length Organism Details
GTP-BINDING PROTEIN ENGA A 456 Bacillus subtilis Gene Name(s): der engA yphC BSU22840

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GCP
Query on GCP

A PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
C11 H18 N5 O13 P3
PHBDHXOBFUBCJD-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
GCP N/A in BindingDB
N/A in BindingMoad
Kd: 25700 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.181
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 62.49 α = 90.00
b = 66.19 β = 90.00
c = 111.74 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-18
  • Released Date: 2012-11-14
  • Deposition author(s): Reiser, J.-B., Housset, D., Foucher, A.-E., Jault, J.-M.

Revision History

No revisions since initial release