4CP3

The structure of BCL6 BTB (POZ) domain in complex with the ansamycin antibiotic rifabutin.

Structural Biology Knowledgebase: 4CP3 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.199

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4CP3

Classification: IMMUNE SYSTEM

Total Structure Weight: 29304.22

Macromolecule Entities
Molecule Chains Length Organism Details
B-CELL LYMPHOMA 6 PROTEIN A, B 124 Homo sapiens Fragment: BTB DOMAIN, RESIDUES 9-128
Mutation: C67R, C84N
Gene Name(s): BCL6 Gene View BCL5 LAZ3 ZBTB27 ZNF51

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RBT
Query on RBT

B RIFABUTIN
9,,18 (Synonym)
C46 H62 N4 O11
ATEBXHFBFRCZMA-VXTBVIBXSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.199
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 35.17 α = 90.00
b = 54.83 β = 95.21
c = 58.16 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-01-31
  • Released Date: 2014-03-19
  • Deposition author(s): Evans, S.E., Fairall, L., Goult, B.T., Jamieson, A.G., Ferrigno, P.K., Ford, R., Wagner, S.D., Schwabe, J.W.R.

Revision History

No revisions since initial release