4CKE

Vaccinia virus capping enzyme complexed with SAH in P1 form

Structural Biology Knowledgebase: 4CKE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.255

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4CKE

Classification: TRANSFERASE

Total Structure Weight: 261277.55

Macromolecule Entities
Molecule Chains Length Organism Details
MRNA-CAPPING ENZYME CATALYTIC SUBUNIT A, D 844 Vaccinia virus EC#: 2.1.1.56 IUBMB 2.7.7.50 IUBMB 3.1.3.33 IUBMB
Gene Name(s): VACWR106 D1R
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
MRNA-CAPPING ENZYME REGULATORY SUBUNIT B, E 287 Vaccinia virus Gene Name(s): VACWR117 D12L
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SAH
Query on SAH

A, D S-ADENOSYL-L-HOMOCYSTEINE
C14 H20 N6 O5 S
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.255
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 61.13 α = 90.01
b = 62.02 β = 85.53
c = 198.50 γ = 71.69

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-01-03
  • Released Date: 2014-03-19
  • Deposition author(s): Kyrieleis, O.J.P., Chang, J., de la Pena, M., Shuman, S., Cusack, S.

Revision History

No revisions since initial release