POP-OUT | CLOSE
 
Cas6 (TTHB231) product complex
DOI:10.2210/pdb4c9d/pdb   NDB ID: 4C9D
4C9D
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/rna
    Structure Weight: 77299.18
    Molecule: CAS6B
    Polymer: 1 Type: protein Length: 268
    Chains: A, B
    Organism: Thermus thermophilus HB8
    Gene Name: TTHB231
    UniProtKB: Protein Feature View | Search PDB | Q53VU8  
    Molecule: R3 REPEAT RNA CLEAVAGE PRODUCT
    Polymer: 2 Type: rna Length: 29
    Chains: C, D
    Fragment: REPEAT STEM-LOOP
    Details: R3 REPEAT RNA CLEAVAGE PRODUCT
    Organism: Thermus thermophilus HB8
     
  •   Structure Validation Hide

    Download full validation report    

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Thermus thermophilus hb8   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct (Thermus thermophilus HB8)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4C8Y  CAS6 (TTHA0078) SUBSTRATE MIMIC COMPLEX 
    4C8Z  CAS6 (TTHA0078) PRODUCT COMPLEX 
    4C97  CAS6 (TTHA0078) H37A MUTANT 
    4C98  THERMUS THERMOPHILUS CAS6 (TTHB231) 
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    23G
    Search 
    23G C10 H13 N5 O10 P2 G rna3PrimeTerminus
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: 4C9D
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Jinek, M.,  Niewoehner, O.,  Doudna, J.A.

    Deposition:   2013-10-02
    Release:   2013-11-06
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   3.00
    R-Value: 0.246 (obs.)
    R-Free: 0.291
    Space Group: P 43 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 75.22 α = 90.00 
    b = 75.22 β = 90.00 
    c = 308.78 γ = 90.00