4C0Q

Transportin 3 in complex with Ran(Q69L)GTP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.42 Å
  • R-Value Free: 0.290
  • R-Value Work: 0.268

Literature

Macromolecules
Sequence Display for 4C0Q

Classification: TRANSPORT PROTEIN / GTP-BINDING PROTEIN

Total Structure Weight: 260498.48

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSPORTIN-3 A, B 923 Homo sapiens Gene Name(s): TNPO3 Gene View IPO12
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
GTP-BINDING NUCLEAR PROTEIN RAN C, D 215 Homo sapiens Mutation: Q69L
Gene Name(s): RAN Gene View ARA24 OK/SW-cl.81
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GTP
Query on GTP

C, D GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

C, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.42 Å
  • R-Value Free: 0.290
  • R-Value Work: 0.268
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 79.95 α = 78.43
b = 93.51 β = 68.29
c = 104.71 γ = 68.28

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-08-06
  • Released Date: 2014-01-22
  • Deposition author(s): Maertens, G., Hare, S., Cherepanov, P.

Revision History

  • Version 1_0: 2014-01-22

    Type: Initial release

  • Version 1_1: 2014-01-29

    Type: Database references, Structure summary

  • Version 1_2: 2014-02-05

    Type: Database references

  • Version 1_3: 2014-03-05

    Type: Database references