4BVJ

Structure of Y105A mutant of PhaZ7 PHB depolymerase

Structural Biology Knowledgebase: 4BVJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.155

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4BVJ

Classification: HYDROLASE

Total Structure Weight: 72587.57

Macromolecule Entities
Molecule Chains Length Organism Details
PHB DEPOLYMERASE PHAZ7 A, B 343 Paucimonas lemoignei EC#: 3.1.1.75 IUBMB
Fragment: RESIDUES 39-380
Mutation: Y105A
Gene Name(s): phaZ7

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NA
Query on NA

A, B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.155
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 41.37 α = 90.00
b = 200.05 β = 114.28
c = 44.18 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-06-26
  • Released Date: 2013-09-18
  • Deposition author(s): Hermawan, S., Subedi, B., Papageorgiou, A.C., Jendrossek, D.

Revision History

  • 2013-12-25
    Type: Citation | Details: JRNL