4BTS

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.7 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 4BTS

Classification: RIBOSOME

Total Structure Weight: 4947943.00


Macromolecule Entities
Molecule Chains Length Organism Details
TRANSLATION INITIATION FACTOR EIF-1A FAMILY PROTEIN A0, B0, C0, D0 211 Tetrahymena thermophila Gene Name(s): TTHERM_00497990
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS28E A1, B1, C1, D1 68 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN S8 A2, B2, C2, D2 208 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS7E A3, B3, C3, D3 197 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN S3A A4, B4, C4, D4 265 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS26E A5, B5, C5, D5 119 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN S27 A6, B6, C6, D6 81 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS10E A7, B7, C7, D7 162 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS25E A8, B8, C8, D8 143 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS31E A9, B9, C9, D9 189 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN SA AB, BB, CB, DB 241 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS3E AC, BC, CC, DC 243 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS9E AD, BD, CD, DD 181 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS2E AE, BE, CE, DE 296 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
EIF1 AF, BF, CF, DF 101 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS5E AG, BG, CG, DG 200 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS22E AH, BH, CH, DH 130 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS16E AI, BI, CI, DI 145 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS20E AJ, BJ, CJ, DJ 120 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS14E AK, BK, CK, DK 151 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN S12 AL, BL, CL, DL 142 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS18E AM, BM, CM, DM 155 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS29E AN, BN, CN, DN 55 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS13E AO, BO, CO, DO 153 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN S24 AP, BP, CP, DP 149 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS11E AQ, BQ, CQ, DQ 157 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RACK1 AR, BR, CR, DR 343 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS15E AS, BS, CS, DS 144 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS19E AT, BT, CT, DT 155 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS12E AU, BU, CU, DU 126 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS17E AV, BV, CV, DV 130 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS4E AW, BW, CW, DW 259 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS30E AX, BX, CX, DX 80 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN S6 AY, BY, CY, DY 293 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S RIBOSOMAL PROTEIN RPS21E AZ, BZ, CZ, DZ 97 Tetrahymena thermophila Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
18S RRNA AA, BA, CA, DA 1753 Tetrahymena thermophila

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A5, A6, A9, AN, B5, B6, B9, BN, C5, C6, C9, CN, D5, D6, D9, DN ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

AA, BA, CA, DA MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.7 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.202
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 209.99 α = 90.00
b = 471.55 β = 91.02
c = 298.54 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2013-06-19
  • Released Date: 2013-07-17
  • Deposition author(s): Weisser, M., Voigts-Hoffmann, F., Rabl, J., Leibundgut, M., Ban, N.
  • This entry supercedes: 4BPE 4BPN 4BPO 4BPP

Revision History

  • Version 1_0: 2013-07-17

    Type: Initial release

  • Version 1_1: 2013-07-24

    Type: Database references

  • Version 1_2: 2014-06-25

    Type: Database references

  • Version 1_3: 2014-12-10

    Type: Other