4BQN

Structural insights into WcbI, a novel polysaccharide biosynthesis enzyme. Native protein.

Structural Biology Knowledgebase: 4BQN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.38 Å
  • R-Value Free: 0.155
  • R-Value Work: 0.116

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4BQN

Classification: TRANSFERASE

Total Structure Weight: 74485.38

Macromolecule Entities
Molecule Chains Length Organism Details
CAPSULAR POLYSACCHARIDE BIOSYNTHESIS PROTEIN A, B 312 Burkholderia pseudomallei Mutation: M1S
Gene Name(s): wcbI BPSL2799
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
COA
Query on COA

A, B COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PGE
Query on PGE

B TRIETHYLENE GLYCOL
C6 H14 O4
ZIBGPFATKBEMQZ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PEG
Query on PEG

A, B DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.38 Å
  • R-Value Free: 0.155
  • R-Value Work: 0.116
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 46.92 α = 63.04
b = 68.00 β = 76.45
c = 71.49 γ = 69.95

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-05-31
  • Released Date: 2013-11-06
  • Deposition author(s): Vivoli, M., Ayres, E., Isupov, M.N., Harmer, N.J.

Revision History

  • 2014-08-13
    Type: Citation | Details: JRNL
  • 2014-02-26
    Type: Citation | Details: JRNL