4BMN

apo structure of short-chain alcohol dehydrogenase from Ralstonia sp. DSM 6428

Structural Biology Knowledgebase: 4BMN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.188
  • R-Value Work: 0.158

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4BMN

Classification: OXIDOREDUCTASE

Total Structure Weight: 109119.36

Macromolecule Entities
Molecule Chains Length Organism Details
ALCLOHOL DEHYDROGENASE/SHORT-CHAIN DEHYDROGENASE A, B, C, D 253 Ralstonia sp. dsmz 6428 EC#: 1.1.1.1 IUBMB
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TAM
Query on TAM

C TRIS(HYDROXYETHYL)AMINOMETHANE
C7 H17 N O3
GKODZWOPPOTFGA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B, C, D 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.188
  • R-Value Work: 0.158
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 136.48 α = 90.00
b = 52.51 β = 116.57
c = 151.47 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-05-10
  • Released Date: 2014-03-19
  • Deposition author(s): Man, H., Kulig, J., Rother, D., Grogan, G.

Revision History

No revisions since initial release