Structure of the M. smegmatis GyrB ATPase domain in complex with an aminopyrazinamide
4B6C
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Isomerase
    Structure Weight: 44982.99
    Molecule: DNA GYRASE SUBUNIT B
    Polymer: 1 Type: protein Length: 196
    Chains: A, B
    EC#: 5.99.1.3   
    Fragment: ATPASE DOMAIN, RESIDUES 9-102,123-213,246-255
    Mutation: YES
    Organism: Mycobacterium smegmatis
    Gene Name: gyrB
    UniProtKB: Protein Feature View | Search PDB | P0C559  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Mycobacterium smegmatis   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    B5U
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    B5U C27 H34 N6 O2
    6-(3,4-dimethylphenyl)-3-[[4-[3-(4-methylpiperazin- 1-yl)propoxy]phenyl]amino]pyrazine-2-carboxamide
    B5U:4B6C
    NA
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    NA Na
    SODIUM ION
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    B5U
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    B5U
    N/Ain BindingDB
    IC50: 690 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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