MITF:M-box complex
DOI:10.2210/pdb4ati/pdb   NDB ID: NA2150
4ATI
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA Binding Protein/dna
    Structure Weight: 37983.26
    Molecule: MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR
    Polymer: 1 Type: protein Length: 118
    Chains: A, B
    Fragment: DNA-BINDING DOMAIN, RESIDUES 180-296
    Organism: Mus musculus
    Gene Names: Mitf Bw Mi Vit
    UniProtKB: Protein Feature View | Search PDB | Q08874  
    Molecule: 5'-D(*GP*TP*TP*AP*GP*CP*AP*CP*AP*TP*GP*AP*CP*CP*CP*T)-3'
    Polymer: 2 Type: dna Length: 16
    Chains: C
    Organism: Mus musculus
    Molecule: 5'-D(*AP*GP*GP*GP*TP*CP*AP*TP*GP*TP*GP*CP*TP*AP*AP*C)-3'
    Polymer: 3 Type: dna Length: 16
    Chains: D
    Organism: Mus musculus
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Mus musculus   Taxonomy   Common Name: House mouse Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct (Mus musculus)   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct (Mus musculus)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4ATH   MITF APO STRUCTURE 
    4ATK   MITF:E-BOX COMPLEX 
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA2150
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Pogenberg, V.,  Deineko, V.,  Wilmanns, M.

    Deposition:   2012-05-08
    Release:   2012-12-12
    Last Modified (REVDAT):   2012-12-19
     
  •   Revision History    Hide
    Mouse over text for details
    2012-12-19
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.60
    R-Value: 0.230 (obs.)
    R-Free: 0.274
    Space Group: C 1 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 118.99 α = 90.00 
    b = 104.26 β = 112.15 
    c = 44.90 γ = 90.00