4AS5

Structure of mouse inositol monophosphatase 1

Structural Biology Knowledgebase: 4AS5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.43 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.160

Literature

Macromolecules
Sequence Display for 4AS5

Classification: HYDROLASE

Total Structure Weight: 124153.81

Macromolecule Entities
Molecule Chains Length Organism Details
INOSITOL MONOPHOSPHATASE 1 A, B, C, D 277 Mus musculus EC#: 3.1.3.25 IUBMB
Mutation: S84Q, F88V
Gene Name(s): Impa1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IOD
Query on IOD

A, B, C, D IODIDE ION
I
XMBWDFGMSWQBCA-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A, B, C, D PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, C, D 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.43 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.160
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 86.79 α = 90.00
b = 81.49 β = 113.77
c = 97.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-27
  • Released Date: 2012-10-10
  • Deposition author(s): Singh, N., Knight, M., Halliday, A.C., Lack, N.A., Lowe, E.D., Churchill, G.C.

Revision History

  • 2012-12-26
    Type: Refinement description | Details: REMARK 3
  • 2012-12-26
    Type: Entry title | Details: TITLE
  • 2012-12-26
    Type: Binding sites and description | Details: REMARK 800
  • 2012-12-26
    Type: Other | Details: REMARK 900
  • 2012-12-26
    Type: Sequence database correspondence | Details: SEQADV
  • 2012-10-17
    Type: Citation | Details: JRNL