4AFT

Aplysia californica AChBP in complex with Varenicline

Structural Biology Knowledgebase: 4AFT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.197

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AFT

Classification: RECEPTOR PROTEIN

Total Structure Weight: 124500.10

Macromolecule Entities
Molecule Chains Length Organism Details
SOLUBLE ACETYLCHOLINE RECEPTOR A, B, C, D, E 217 Aplysia californica Fragment: RESIDUES 20-236
Mutation: A41V, A136V
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
QMR
Query on QMR

A, B, C, D, E VARENICLINE
C13 H13 N3
JQSHBVHOMNKWFT-DTORHVGOSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
QMR N/A in BindingDB
N/A in BindingMoad
Kd: 342 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.197
  • Space Group: I 2 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 207.30 α = 90.00
b = 207.30 β = 90.00
c = 207.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-23
  • Released Date: 2012-05-02
  • Deposition author(s): Rucktooa, P., Haseler, C.A., Vanelke, R., Smit, A.B., Gallagher, T., Sixma, T.K.

Revision History

  • 2012-07-25
    Type: Citation | Details: JRNL