4ACP

Deactivation of human IgG1 Fc by endoglycosidase treatment

Structural Biology Knowledgebase: 4ACP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.49 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 4ACP

Classification: IMMUNE SYSTEM

Total Structure Weight: 54252.68

Macromolecule Entities
Molecule Chains Length Organism Details
IG GAMMA-1 CHAIN C REGION A, B 240 Homo sapiens Fragment: IMMUNOGLOBULIN GAMMA, FC, RESIDUES 101-329
Gene Name(s): IGHG1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.49 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.195
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 69.29 α = 90.00
b = 110.86 β = 107.92
c = 77.51 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-12-16
  • Released Date: 2012-04-25
  • Deposition author(s): Raman, K., Bowden, T.A., Krishna, B.A., Dwek, R.A., Crispin, M., Scanlan, C.N.

Revision History

  • 2012-06-13
    Type: Other | Details: Citation