479D

CRYSTAL STRUCTURE A DNA:RNA HYBRID DUPLEX, A DYNAMIC MODEL FOR RNASE H RECOGNITION

Structural Biology Knowledgebase: 479D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.199

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 479D

Classification: DNA / RNA HYBRID

Total Structure Weight: 5614.68

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*TP*CP*TP*TP*CP*TP*TP*C)-3') A 9 synthetic
RNA (5'-R(*GP*AP*AP*GP*AP*AP*GP*AP*G)-3') B 9 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.199
  • Space Group: P 61
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 49.15 α = 90.00
b = 49.15 β = 90.00
c = 46.13 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-07-08
  • Released Date: 2000-05-15
  • Deposition author(s): Xiong, Y., Sundaralingam, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4