476D

CALCIUM FORM OF B-DNA UNDECAMER GCGAATTCGCG

Structural Biology Knowledgebase: 476D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.182

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 476D

Classification: DNA

Total Structure Weight: 6988.96

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3' A, B 11 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.182
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 38.76 α = 90.00
b = 38.76 β = 90.00
c = 99.08 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-06-25
  • Released Date: 1999-07-19
  • Deposition author(s): Minasov, G., Tereshko, V., Egli, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4