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A "HYDRAT-ION SPINE" IN A B-DNA MINOR GROOVE
DOI:10.2210/pdb461d/pdb   NDB ID: BD0013
461D
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 7496.90
    Molecule: DNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3')
    Polymer: 1 Type: dna Length: 12
    Chains: A, B
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
    RB
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    RB Rb
    RUBIDIUM ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    TAF
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    TAF C10 H14 F N2 O8 P DT dnaLinking
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: BD0013
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Tereshko, V.,  Minasov, G.,  Egli, M.

    Deposition:   1999-03-12
    Release:   1999-04-08
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.50
    R-Value: 0.186 (obs.)
    R-Free: n/a
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 25.07 α = 90.00 
    b = 39.72 β = 90.00 
    c = 65.77 γ = 90.00