434D

5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3'

Structural Biology Knowledgebase: 434D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.16 Å
  • R-Value Free: 0.180
  • R-Value Work: 0.124

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 434D

Classification: RNA

Total Structure Weight: 8978.17

Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3') A, C 7 synthetic
RNA (5'-R(*GP*GP*GP*GP*CP*UP*A)-3') B, D 7 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SR
Query on SR

B STRONTIUM ION
Sr
PWYYWQHXAPXYMF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.16 Å
  • R-Value Free: 0.180
  • R-Value Work: 0.124
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 26.30 α = 110.50
b = 28.90 β = 96.90
c = 28.90 γ = 96.90

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1998-10-23
  • Released Date: 1999-06-14
  • Deposition author(s): Mueller, U., Schuebel, H., Sprinzl, M., Heinemann, U.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4