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D(GGCCAATTGG) COMPLEXED WITH DAPI
DOI:10.2210/pdb432d/pdb   NDB ID: DD0002
432D
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 6447.43
    Molecule: DNA (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')
    Polymer: 1 Type: dna Length: 10
    Chains: A, B
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    DAP
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    DAP C16 H15 N5
    6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE
    DAP:432D
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: DD0002
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Vlieghe, D.,  Van Meervelt, L.

    Deposition:   1998-10-14
    Release:   1999-12-18
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.89
    R-Value: 0.192 (all)
    R-Free: n/a
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 25.62 α = 90.00 
    b = 36.56 β = 90.00 
    c = 52.96 γ = 90.00